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RNU6-117P RNA, U6 small nuclear 117, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481213, updated on 10-Oct-2023

Summary

Official Symbol
RNU6-117Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 117, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47080
See related
Ensembl:ENSG00000202285 AllianceGenome:HGNC:47080
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See RNU6-117P in Genome Data Viewer
Location:
6q21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (106738948..106739054, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (107915031..107915137, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (107186823..107186929, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377927 Neighboring gene long intergenic non-protein coding RNA 2526 Neighboring gene long intergenic non-protein coding RNA 2532 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:107196222-107197147 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24894 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:107222075-107222575 Neighboring gene Sharpr-MPRA regulatory region 10433 Neighboring gene microRNA 587 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:107252150-107252910 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24895 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24896 Neighboring gene uncharacterized LOC124901552

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045443.1 

    Range
    101..207
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    106738948..106739054 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    107915031..107915137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)