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RNU2-39P RNA, U2 small nuclear 39, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480214, updated on 4-Mar-2025
Official Symbol
RNU2-39Pprovided by HGNC
Official Full Name
RNA, U2 small nuclear 39, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48532
See related
Ensembl:ENSG00000222536 AllianceGenome:HGNC:48532
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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See RNU2-39P in Genome Data Viewer
Location:
2p13.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (72721806..72722003)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (72734723..72734920)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (72948935..72949132)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72362955-72363918 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:72365847-72366810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72373667-72374189 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72374379-72374880 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:72378306-72378481 Neighboring gene cytochrome P450 family 26 subfamily B member 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:72463389-72463890 Neighboring gene exocyst complex component 6B Neighboring gene ribosomal protein S15a pseudogene 13 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:72773139-72773380 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72865570-72866299 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72866300-72867028 Neighboring gene Sharpr-MPRA regulatory region 2924 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:72978191-72979035 Neighboring gene small nucleolar RNA SNORD78 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72999013-72999514 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:72999515-73000014 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:73052157-73052667 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11625 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:73110580-73110740 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11626 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:73115417-73115591 Neighboring gene sepiapterin reductase

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Review eQTL and phenotype association data in this region using PheGenI

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045075.1 

    Range
    101..298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    72721806..72722003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    72734723..72734920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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