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RNU6-826P RNA, U6 small nuclear 826, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479931, updated on 10-Oct-2023

Summary

Official Symbol
RNU6-826Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 826, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47789
See related
Ensembl:ENSG00000252636 AllianceGenome:HGNC:47789
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See RNU6-826P in Genome Data Viewer
Location:
17q21.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (49036352..49036449)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (49899708..49899805)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (47113714..47113811)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47041863-47042412 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:47043544-47044044 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:47044045-47044545 Neighboring gene gastric inhibitory polypeptide Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8665 Neighboring gene uncharacterized LOC124904020 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:47081123-47081644 Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47089629-47090182 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47090183-47090738 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47091293-47091848 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47092958-47093511 Neighboring gene Sharpr-MPRA regulatory region 671 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:47110305-47110846 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:47126439-47127348 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:47135543-47136044 Neighboring gene NANOG hESC enhancer GRCh37_chr17:47163998-47164523 Neighboring gene B4GALNT2 pseudogene 1 Neighboring gene uncharacterized LOC124904021 Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045435.1 

    Range
    101..198
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    49036352..49036449
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    49899708..49899805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)