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RN7SL542P RNA, 7SL, cytoplasmic 542, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479419, updated on 4-Mar-2025

Summary

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Official Symbol
RN7SL542Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 542, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46558
See related
Ensembl:ENSG00000243633 AllianceGenome:HGNC:46558
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SL542P in Genome Data Viewer
Location:
7p15.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (21215537..21215812, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (21351630..21351905, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (21255156..21255431, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:20866537-20867736 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:20874484-20874984 Neighboring gene long intergenic non-protein coding RNA 1162 Neighboring gene ribosomal protein L23 pseudogene 8 Neighboring gene ribosomal protein S26 pseudogene 30 Neighboring gene VISTA enhancer hs1007 Neighboring gene VISTA enhancer hs110 Neighboring gene VISTA enhancer hs1148 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:21050446-21051645 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:21069658-21070388 Neighboring gene VISTA enhancer hs1226 Neighboring gene VISTA enhancer hs701 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_98226 Neighboring gene argininosuccinate synthetase 1 pseudogene 11 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:21300935-21301660 Neighboring gene NANOG hESC enhancer GRCh37_chr7:21320731-21321232 Neighboring gene MPRA-validated peak6423 silencer Neighboring gene MPRA-validated peak6424 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25695 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25696 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25697 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25698 Neighboring gene MPRA-validated peak6425 silencer Neighboring gene RNA, U1 small nuclear 15, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045433.1 

    Range
    101..376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    21215537..21215812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    21351630..21351905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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