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RNU6-4P RNA, U6 small nuclear 4, pseudogene [ Homo sapiens (human) ]

Gene ID: 106478914, updated on 17-Jun-2024

Summary

Official Symbol
RNU6-4Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 4, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:34253
See related
Ensembl:ENSG00000206932 AllianceGenome:HGNC:34253
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U6-4; RNU6-4
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Genomic context

See RNU6-4P in Genome Data Viewer
Location:
3q26.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (181231737..181231842)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (184033442..184033547)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (180949525..180949630)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20879 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14927 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:180641841-180642341 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14928 Neighboring gene FMR1 autosomal homolog 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19 Neighboring gene VISTA enhancer hs192 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:180792991-180793622 Neighboring gene SOX2 overlapping transcript Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:181010183-181011382 Neighboring gene Sharpr-MPRA regulatory region 15084 Neighboring gene FAU pseudogene 2 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:181077271-181078470 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:181102468-181102968 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:181102969-181103469 Neighboring gene uncharacterized LOC102724604

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043454.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    181231737..181231842
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    184033442..184033547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)