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rfxank regulatory factor X associated ankyrin containing protein [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105932466, updated on 13-Oct-2018

Summary

Gene symbol
rfxank
Gene description
regulatory factor X associated ankyrin containing protein
See related
Ensembl:ENSFHEG00000021871
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs

Genomic context

See rfxank in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234360.1 (874780..880375, complement)

NW_012234360.1Genomic Context describing neighboring genes Neighboring gene neurocan core protein Neighboring gene uncharacterized LOC110369083 Neighboring gene nuclear receptor 2C2 associated protein Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene transmembrane protein 221 Neighboring gene myocyte enhancer factor 2B

Genomic regions, transcripts, and products

Genomic Sequence:
NW_012234360 Unplaced Scaffold Reference Fundulus_heteroclitus-3.0.2 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Fundulus_heteroclitus-3.0.2 Primary Assembly

Genomic

  1. NW_012234360.1 Reference Fundulus_heteroclitus-3.0.2 Primary Assembly

    Range
    874780..880375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012871653.2XP_012727107.1  DNA-binding protein RFXANK

    UniProtKB/TrEMBL
    A0A146QZR2
    Related
    ENSFHEP00000034261.1, ENSFHET00000029343.1
    Conserved Domains (4) summary
    cd00204
    Location:98220
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:106197
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:72122
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:101132
    ANK; ANK repeat [structural motif]
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