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pak4 p21 (RAC1) activated kinase 4 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105903242, updated on 8-Apr-2017

Summary

Gene symbol
pak4
Gene description
p21 (RAC1) activated kinase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs

Genomic context

See pak4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM96633v1 (GCF_000966335.1) Unplaced Scaffold NW_012221740.1 (1492255..1504584, complement)

NW_012221740.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 171 Neighboring gene clarin 1 Neighboring gene SUMO1 activating enzyme subunit 1 Neighboring gene uncharacterized LOC105903254 Neighboring gene kelch-like protein 3

Genomic regions, transcripts, and products

Genomic Sequence:
NW_012221740.1 Unplaced Scaffold Reference ASM96633v1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
serine/threonine-protein kinase PAK 4

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM96633v1 Primary Assembly

Genomic

  1. NW_012221740.1 Reference ASM96633v1 Primary Assembly

    Range
    1492255..1504584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012830956.1XP_012686410.1  serine/threonine-protein kinase PAK 4 isoform X1

    See identical proteins and their annotated locations for XP_012686410.1

    Conserved Domains (3) summary
    smart00220
    Location:389633
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd01093
    Location:1246
    CRIB_PAK_like; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
    cl21453
    Location:363654
    PKc_like; Protein Kinases, catalytic domain
  2. XM_012830960.1XP_012686414.1  serine/threonine-protein kinase PAK 4 isoform X4

    Conserved Domains (3) summary
    smart00220
    Location:384628
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd01093
    Location:1246
    CRIB_PAK_like; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
    cl21453
    Location:358649
    PKc_like; Protein Kinases, catalytic domain
  3. XM_012830958.1XP_012686412.1  serine/threonine-protein kinase PAK 4 isoform X3

    Conserved Domains (3) summary
    smart00220
    Location:385629
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd01093
    Location:1246
    CRIB_PAK_like; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
    cl21453
    Location:359650
    PKc_like; Protein Kinases, catalytic domain
  4. XM_012830957.1XP_012686411.1  serine/threonine-protein kinase PAK 4 isoform X2

    Conserved Domains (3) summary
    smart00220
    Location:388632
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd01093
    Location:1246
    CRIB_PAK_like; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
    cl21453
    Location:362653
    PKc_like; Protein Kinases, catalytic domain
  5. XM_012830955.1XP_012686409.1  serine/threonine-protein kinase PAK 4 isoform X1

    See identical proteins and their annotated locations for XP_012686409.1

    Conserved Domains (3) summary
    smart00220
    Location:389633
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd01093
    Location:1246
    CRIB_PAK_like; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
    cl21453
    Location:363654
    PKc_like; Protein Kinases, catalytic domain
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