U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cmc4 C-X9-C motif containing 4 [ Mus musculus (house mouse) ]

Gene ID: 105886298, updated on 13-Mar-2024

Summary

Official Symbol
Cmc4provided by MGI
Official Full Name
C-X9-C motif containing 4provided by MGI
Primary source
MGI:MGI:5637812
See related
Ensembl:ENSMUSG00000090110 AllianceGenome:MGI:5637812
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mtcp1nb; p8MTCP1
Summary
Predicted to be located in mitochondrion. Predicted to be active in mitochondrial intermembrane space. Orthologous to human CMC4 (C-X9-C motif containing 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E18 (RPKM 6.2), CNS E14 (RPKM 5.8) and 28 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Cmc4 in Genome Data Viewer
Location:
X A7.3; X
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (74448452..74460190, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (75404846..75416584, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene coagulation factor VIII Neighboring gene predicted gene 8522 Neighboring gene STARR-seq mESC enhancer starr_47381 Neighboring gene STARR-seq mESC enhancer starr_47382 Neighboring gene FUN14 domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E11683 Neighboring gene mature T cell proliferation 1 Neighboring gene BRCA1/BRCA2-containing complex, subunit 3 Neighboring gene zinc finger and SCAN domain containing 12 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
cx9C motif-containing protein 4
Names
C-x(9)-C motif containing 4
MTCP-1 type A
mature T-cell proliferation 1 neighbor protein
mature T-cell proliferation-1 type A
protein p8 MTCP-1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001294277.1NP_001281206.1  cx9C motif-containing protein 4

    See identical proteins and their annotated locations for NP_001281206.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AL671860, AL731844
    Consensus CDS
    CCDS41030.1
    UniProtKB/Swiss-Prot
    Q61908
    UniProtKB/TrEMBL
    A3KGA5
    Related
    ENSMUSP00000117381.3, ENSMUST00000149863.3
    Conserved Domains (1) summary
    pfam08991
    Location:659
    MTCP1; Mature-T-Cell Proliferation I type
  2. NM_010839.6NP_034969.1  cx9C motif-containing protein 4

    See identical proteins and their annotated locations for NP_034969.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AL671860, AL731844, DV655269
    Consensus CDS
    CCDS41030.1
    UniProtKB/Swiss-Prot
    Q61908
    UniProtKB/TrEMBL
    A3KGA5
    Related
    ENSMUSP00000033543.8, ENSMUST00000033543.14
    Conserved Domains (1) summary
    pfam08991
    Location:659
    MTCP1; Mature-T-Cell Proliferation I type

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    74448452..74460190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)