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SBDS SBDS ribosome maturation factor [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105807068, updated on 13-Mar-2024
Gene symbol
SBDS
Gene description
SBDS ribosome maturation factor
See related
Ensembl:ENSPCOG00000021098
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
all
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See SBDS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012139414.1 (6564815..6572598)

NW_012139414.1Genomic Context describing neighboring genes Neighboring gene calneuron 1 Neighboring gene S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like Neighboring gene septin-10 pseudogene Neighboring gene probable ATP-dependent RNA helicase DDX28 Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit A pseudogene

Genomic Sequence:
NW_012139414.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytosolic ribosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribosome maturation protein SBDS
Names
SBDS, ribosome assembly guanine nucleotide exchange factor

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012139414.1 Reference Pcoq_1.0 Primary Assembly

    Range
    6564815..6572598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012640342.1 → XP_012495796.1  ribosome maturation protein SBDS

    UniProtKB/TrEMBL
    A0A2K6FWR1
    Related
    ENSPCOP00000018413.1, ENSPCOT00000029055.1
    Conserved Domains (3) summary
    COG1500
    Location:9 → 241
    Sdo1; Ribosome maturation protein Sdo1 [Translation, ribosomal structure and biogenesis]
    pfam01172
    Location:17 → 98
    SBDS; Shwachman-Bodian-Diamond syndrome (SBDS) protein
    pfam09377
    Location:107 → 224
    SBDS_C; SBDS protein C-terminal domain
Nucleotide Protein
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