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LOC105770241 transcription factor VIP1-like [ Gossypium raimondii ]

Gene ID: 105770241, updated on 12-Mar-2017

Summary

Gene symbol
LOC105770241
Gene description
transcription factor VIP1-like
Locus tag
B456_009G285000
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Genomic context

See LOC105770241 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (24242672..24246848, complement)

Chromosome 9 - NC_026937.1Genomic Context describing neighboring genes Neighboring gene cell wall integrity protein scw1-like Neighboring gene SKP1-interacting partner 15 Neighboring gene protein FAM188A-like Neighboring gene uncharacterized LOC105770246

Genomic regions, transcripts, and products

Genomic Sequence:
NC_026937.1 Chromosome 9 Reference Graimondii2_0 Primary Assembly

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • MAPK signaling pathway - plant, organism-specific biosystem (from KEGG)
    MAPK signaling pathway - plant, organism-specific biosystemMitogen-activated protein kinase (MAPK) cascades, the evolutionarily conserved signaling modules in all eukaryotes, serve in transducing extracellular signals to the nucleus or cytoplasm for appropri...

General protein information

Preferred Names
transcription factor VIP1-like

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Graimondii2_0 Primary Assembly

Genomic

  1. NC_026937.1 Reference Graimondii2_0 Primary Assembly

    Range
    24242672..24246848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012591345.1XP_012446799.1  transcription factor VIP1-like

    See identical proteins and their annotated locations for XP_012446799.1

    UniProtKB/TrEMBL
    A0A0D2TWS4
    Conserved Domains (2) summary
    cd14703
    Location:168217
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
    cl23720
    Location:181265
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
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