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SCN9A sodium voltage-gated channel alpha subunit 9 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105708905, updated on 17-Dec-2017

Summary

Gene symbol
SCN9A
Gene description
sodium voltage-gated channel alpha subunit 9
See related
Ensembl:ENSANAG00000026511
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs

Genomic context

See SCN9A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018500483.1 (5819715..5933048)
100 previous assembly Anan_1.0 (GCF_000952055.1) Unplaced Scaffold NW_012187313.1 (5958565..6068855)

NW_018500483.1Genomic Context describing neighboring genes Neighboring gene barrier-to-autointegration factor pseudogene Neighboring gene splicing factor, proline- and glutamine-rich pseudogene Neighboring gene sodium voltage-gated channel alpha subunit 7 Neighboring gene uncharacterized LOC105708906 Neighboring gene sodium voltage-gated channel alpha subunit 1 Neighboring gene tetratricopeptide repeat domain 21B

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
sodium channel protein type 9 subunit alpha

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Aotus nancymaae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Anan_2.0 Primary Assembly

Genomic

  1. NW_018500483.1 Reference Anan_2.0 Primary Assembly

    Range
    5819715..5933048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012440613.1XP_012296036.1  sodium channel protein type 9 subunit alpha isoform X1

    Related
    ENSANAP00000017281.1, ENSANAT00000035136.1
    Conserved Domains (5) summary
    cd13433
    Location:14581510
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:12091466
    Ion_trans; Ion transport protein
    pfam06512
    Location:9821187
    Na_trans_assoc; Sodium ion transport-associated
    pfam11933
    Location:488612
    Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
    pfam16905
    Location:17821837
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
  2. XM_012440614.1XP_012296037.1  sodium channel protein type 9 subunit alpha isoform X2

    Conserved Domains (5) summary
    cd13433
    Location:14471499
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:11981455
    Ion_trans; Ion transport protein
    pfam06512
    Location:9711176
    Na_trans_assoc; Sodium ion transport-associated
    pfam11933
    Location:488612
    Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
    pfam16905
    Location:17711826
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
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