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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105705190, updated on 3-Dec-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
See related
Ensembl:ENSANAG00000035330
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988428.1 (72140694..72237505, complement)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018509877.1 (955291..1052157, complement)

NW_026988428.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105705184 Neighboring gene ninjurin 2 Neighboring gene U7 small nuclear RNA Neighboring gene poly(rC)-binding protein 1-like Neighboring gene uridine-cytidine kinase 2-like Neighboring gene putative POM121-like protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988428.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    72140694..72237505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012434965.2 → XP_012290388.2  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A2K5EQW6

  2. XM_012434966.2 → XP_012290389.2  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A2K5EQW6

RNA

  1. XR_001104620.2 RNA Sequence

  2. XR_001104619.2 RNA Sequence

  3. XR_002477970.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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