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RABAC1 Rab acceptor 1 [ Homo sapiens (human) ]

Gene ID: 10567, updated on 18-Aug-2020

Summary

Official Symbol
RABAC1provided by HGNC
Official Full Name
Rab acceptor 1provided by HGNC
Primary source
HGNC:HGNC:9794
See related
Ensembl:ENSG00000105404 MIM:604925
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRA1; YIP3; PRAF1
Expression
Ubiquitous expression in fat (RPKM 42.3), stomach (RPKM 42.2) and 25 other tissues See more
Orthologs

Genomic context

See RABAC1 in Genome Data Viewer
Location:
19q13.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (41956683..41959321, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (42460833..42463530, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ETS repressor factor like Neighboring gene uncharacterized LOC100505585 Neighboring gene ATPase Na+/K+ transporting subunit alpha 3 Neighboring gene glutamate ionotropic receptor kainate type subunit 5 Neighboring gene Sharpr-MPRA regulatory regions 411/7488 and 4104

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Envelope transmembrane glycoprotein gp41 env HIV-1 gp41 colocalizes and binds to prenylated Rab acceptor 1 (PRA1) PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
proline-rich region binding IEA
Inferred from Electronic Annotation
more info
 
protein C-terminus binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane HDA PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
prenylated Rab acceptor protein 1
Names
PRA1 domain family 1
PRA1 family protein 1
Rab acceptor 1 (prenylated)
prenylated Rab acceptor 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_006423.3NP_006414.2  prenylated Rab acceptor protein 1

    See identical proteins and their annotated locations for NP_006414.2

    Status: VALIDATED

    Source sequence(s)
    AI376198, CF242972, DB454056
    Consensus CDS
    CCDS12593.1
    UniProtKB/Swiss-Prot
    Q9UI14
    Related
    ENSP00000222008.5, ENST00000222008.11
    Conserved Domains (1) summary
    pfam03208
    Location:40173
    PRA1; PRA1 family protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    41956683..41959321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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