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LOC105632454 heat stress transcription factor A-1b [ Jatropha curcas ]

Gene ID: 105632454, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105632454
Gene description
heat stress transcription factor A-1b
Locus tag
JCGZ_02539
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590831.1 (798804..805439)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124202.1 (69843..78330, complement)

NW_023590831.1Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase MCC1 Neighboring gene uncharacterized LOC105632456 Neighboring gene NAC domain-containing protein 91 Neighboring gene heat stress transcription factor A-1b-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global analysis of transcriptome responses and gene expression profiles to cold stress of Jatropha curcas L. Wang H, et al. PLoS One, 2013. PMID 24349370, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat stress transcription factor A-1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023590831.1 Reference RJC1_Hi-C Primary Assembly

    Range
    798804..805439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012214836.3 → XP_012070226.2  heat stress transcription factor A-1b

    UniProtKB/TrEMBL
    A0A067L5Z1
    Conserved Domains (1) summary
    smart00415
    Location:8 → 101
    HSF; heat shock factor
Nucleotide Protein
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