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Zfp957 zinc finger protein 957 [ Mus musculus (house mouse) ]

Gene ID: 105590, updated on 8-Feb-2024

Summary

Official Symbol
Zfp957provided by MGI
Official Full Name
zinc finger protein 957provided by MGI
Primary source
MGI:MGI:2145729
See related
Ensembl:ENSMUSG00000071262 AllianceGenome:MGI:2145729
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 1.6), ovary adult (RPKM 0.2) and 5 other tissues See more
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Genomic context

See Zfp957 in Genome Data Viewer
Location:
14 D3; 14 42.56 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (79449795..79484807, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (79212355..79247367, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene von Willebrand factor A domain containing 8 Neighboring gene predicted gene, 18081 Neighboring gene predicted gene 4632 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79643421-79643608 Neighboring gene STARR-seq mESC enhancer starr_37253 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79667780-79667981 Neighboring gene STARR-seq mESC enhancer starr_37256 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79680321-79680522 Neighboring gene STARR-seq mESC enhancer starr_37257 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79691968-79692228 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79693274-79693461 Neighboring gene regulator of cell cycle Neighboring gene STARR-positive B cell enhancer ABC_E11576 Neighboring gene N(alpha)-acetyltransferase 16, NatA auxiliary subunit

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in nuclear body ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
uncharacterized protein LOC105590

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033215.3NP_001028387.1  uncharacterized protein LOC105590

    See identical proteins and their annotated locations for NP_001028387.1

    Status: VALIDATED

    Source sequence(s)
    AC139758
    Consensus CDS
    CCDS49551.1
    UniProtKB/TrEMBL
    B9EKX7, Q3UT76
    Related
    ENSMUSP00000124930.2, ENSMUST00000161649.9
    Conserved Domains (1) summary
    cl22851
    Location:469553
    PHD_SF; PHD finger superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    79449795..79484807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)