Format

Send to:

Choose Destination

RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105576269, updated on 17-Dec-2017

Summary

Gene symbol
RALGPS1
Gene description
Ral GEF with PH domain and SH3 binding motif 1
See related
Ensembl:ENSCATG00000020584
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs

Genomic context

See RALGPS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012004495.1 (4371781..4708625, complement)

NW_012004495.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105576262 Neighboring gene solute carrier family 2 member 8 Neighboring gene GTPase activating Rap/RanGAP domain like 3 Neighboring gene angiopoietin like 2 Neighboring gene neugrin pseudogene Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene uncharacterized LOC105576270 Neighboring gene LIM homeobox transcription factor 1 beta

Genomic regions, transcripts, and products

Genomic Sequence:
NW_012004495.1 Unplaced Scaffold Reference Caty_1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012004495.1 Reference Caty_1.0

    Range
    4371781..4708625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012039129.1XP_011894519.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X7

    See identical proteins and their annotated locations for XP_011894519.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:391506
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:390501
    PH; PH domain
  2. XM_012039118.1XP_011894508.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    See identical proteins and their annotated locations for XP_011894508.1

    Related
    ENSCATP00000006851.1, ENSCATT00000024258.1
    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
  3. XM_012039123.1XP_011894513.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    See identical proteins and their annotated locations for XP_011894513.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
  4. XM_012039121.1XP_011894511.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    See identical proteins and their annotated locations for XP_011894511.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
  5. XM_012039132.1XP_011894522.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X10

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:391506
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:390501
    PH; PH domain
  6. XM_012039120.1XP_011894510.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    See identical proteins and their annotated locations for XP_011894510.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
  7. XM_012039127.1XP_011894517.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5

    Conserved Domains (3) summary
    smart00147
    Location:46258
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:431546
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:430541
    PH; PH domain
  8. XM_012039122.1XP_011894512.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    See identical proteins and their annotated locations for XP_011894512.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
  9. XM_012039124.1XP_011894514.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    See identical proteins and their annotated locations for XP_011894514.1

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:460571
    PH; PH domain
  10. XM_012039119.1XP_011894509.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

    Conserved Domains (3) summary
    smart00147
    Location:38271
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:444559
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:443554
    PH; PH domain
  11. XM_012039126.1XP_011894516.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4

    Conserved Domains (3) summary
    cd13310
    Location:403518
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:402513
    PH; PH domain
    cl02485
    Location:46230
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...
  12. XM_012039131.1XP_011894521.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X9

    Related
    ENSCATP00000006874.1, ENSCATT00000024309.1
    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:363478
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:362473
    PH; PH domain
  13. XM_012039128.1XP_011894518.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X6

    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:390505
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:389500
    PH; PH domain
  14. XM_012039135.1XP_011894525.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X13

    Related
    ENSCATP00000006881.1, ENSCATT00000024326.1
    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:391506
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:390501
    PH; PH domain
  15. XM_012039130.1XP_011894520.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X8

    Conserved Domains (3) summary
    smart00147
    Location:13229
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:402517
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:401512
    PH; PH domain
  16. XM_012039133.1XP_011894523.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X11

    Conserved Domains (1) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
  17. XM_012039134.1XP_011894524.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X12

    Conserved Domains (1) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases

RNA

  1. XR_001011546.1 RNA Sequence

  2. XR_001011545.1 RNA Sequence

Support Center