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LINC02778 long intergenic non-protein coding RNA 2778 [ Homo sapiens (human) ]

Gene ID: 105378760, updated on 8-Apr-2022

Summary

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Official Symbol
LINC02778provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2778provided by HGNC
Primary source
HGNC:HGNC:54298
See related
AllianceGenome:HGNC:54298
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LINC02778 in Genome Data Viewer
Location:
1p32.1
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (60114825..60258871)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (59993655..60137703)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene chromosome 1 open reading frame 87 Neighboring gene piggyBac transposable element derived 4 pseudogene 8 Neighboring gene uncharacterized LOC107984963 Neighboring gene uncharacterized LOC105378761 Neighboring gene uncharacterized LOC107984962 Neighboring gene uncharacterized LOC107985379

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    60114825..60258871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_947430.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    59993655..60137703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070277.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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