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LINC01409 long intergenic non-protein coding RNA 1409 [ Homo sapiens (human) ]

Gene ID: 105378580, updated on 13-Mar-2020

Summary

Official Symbol
LINC01409provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1409provided by HGNC
Primary source
HGNC:HGNC:50701
See related
Ensembl:ENSG00000237491
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 1.1), prostate (RPKM 0.6) and 24 other tissues See more

Genomic context

See LINC01409 in Genome Data Viewer
Location:
1p36.33
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (778742..809798)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1199, pseudogene Neighboring gene uncharacterized LOC100288069 Neighboring gene family with sequence similarity 87 member B Neighboring gene long intergenic non-protein coding RNA 115

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000001.11 Chromosome 1 Reference GRCh38.p13 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    778742..809798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_946806.3 RNA Sequence

  2. XR_002958525.1 RNA Sequence

    Related
    ENST00000443772.2
  3. XR_002958522.1 RNA Sequence

  4. XR_002958523.1 RNA Sequence

  5. XR_002958524.1 RNA Sequence

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