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UNC5C-AS1 UNC5C antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105377335, updated on 10-Oct-2023

Summary

Official Symbol
UNC5C-AS1provided by HGNC
Official Full Name
UNC5C antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55246
See related
AllianceGenome:HGNC:55246
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in thyroid (RPKM 2.8), brain (RPKM 2.7) and 19 other tissues See more
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Genomic context

See UNC5C-AS1 in Genome Data Viewer
Location:
4q22.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (95549148..95587728)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (98864285..98902859)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein receptor type 1B Neighboring gene uncharacterized LOC124900735 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:96140095-96141294 Neighboring gene Sharpr-MPRA regulatory region 12130 Neighboring gene unc-5 netrin receptor C Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:96321208-96321708 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:96321709-96322209 Neighboring gene uncharacterized LOC124900736 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21730 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:96506064-96507263 Neighboring gene ribosomal protein L30 pseudogene 6 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:96650673-96651268 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:96719717-96720414 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:96759303-96759905 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:96760761-96761262 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:96761263-96761762 Neighboring gene pyruvate dehydrogenase E1 subunit alpha 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_183913.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC106881
  2. NR_183914.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC106881

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    95549148..95587728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    98864285..98902859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)