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SHROOM3-AS1 SHROOM3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105377289, updated on 8-Apr-2022

Summary

Official Symbol
SHROOM3-AS1provided by HGNC
Official Full Name
SHROOM3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41265
See related
AllianceGenome:HGNC:41265
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See SHROOM3-AS1 in Genome Data Viewer
Location:
4q21.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (76742034..76802573, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (80082738..80143269, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene shroom family member 3 Neighboring gene uncharacterized LOC105377290 Neighboring gene SUMO2 pseudogene 11 Neighboring gene Sharpr-MPRA regulatory region 6551 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:77702656-77703855 Neighboring gene uncharacterized LOC124900719 Neighboring gene putative uncharacterized protein encoded by LINC00596

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    76742034..76802573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_938903.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    80082738..80143269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074729.1 RNA Sequence