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LOC105375387 uncharacterized LOC105375387 [ Homo sapiens (human) ]

Gene ID: 105375387, updated on 25-Oct-2023

Summary

Gene symbol
LOC105375387
Gene description
uncharacterized LOC105375387
See related
Ensembl:ENSG00000227863
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRALR
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC105375387 in Genome Data Viewer
Location:
7q21.13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (89443930..89496918)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (90694621..90747716)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:88389160-88389704 Neighboring gene COX6A1 pseudogene 7 Neighboring gene zinc finger protein 804B Neighboring gene testis expressed 47 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:88725221-88725383 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:88732804-88733496 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:89018574-89018770 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:89179295-89179509 Neighboring gene uncharacterized LOC107986817 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:89253154-89254353 Neighboring gene RNA, U6 small nuclear 274, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187912.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000663935.1
  2. NR_187913.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000663934.1
  3. NR_187914.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
  4. NR_187915.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000655452.1
  5. NR_187916.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000655037.1
  6. NR_187917.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000661644.1
  7. NR_187918.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
  8. NR_187919.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
  9. NR_187920.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000654764.1
  10. NR_187921.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
  11. NR_187922.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
  12. NR_187923.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000667286.1
  13. NR_187924.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
  14. NR_187925.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002383
    Related
    ENST00000665308.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    89443930..89496918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    90694621..90747716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)