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LOC105375222 uncharacterized LOC105375222 [ Homo sapiens (human) ]

Gene ID: 105375222, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105375222
Gene description
uncharacterized LOC105375222
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375222 in Genome Data Viewer
Location:
7p14.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (30983824..31029846)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (31121459..31169190)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr7:30961348-30961528 Neighboring gene aquaporin 1 (Colton blood group) Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25820 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:31014486-31014664 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18074 Neighboring gene growth hormone releasing hormone receptor Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:31024083-31024608 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:31029507-31030287 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:31032726-31033925 Neighboring gene uncharacterized LOC105375221 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31066433-31067036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31067037-31067640 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31082296-31082796 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31082797-31083297 Neighboring gene ADCYAP receptor type I Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:31109473-31109974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31117973-31118706 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31141510-31142010 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:31145675-31146470 Neighboring gene small integral membrane protein 14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    30983824..31029846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745156.2 RNA Sequence

  2. XR_927160.2 RNA Sequence

  3. XR_001745155.2 RNA Sequence

  4. XR_927159.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    31121459..31169190
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078381.1 RNA Sequence

  2. XR_007078379.1 RNA Sequence

  3. XR_007078378.1 RNA Sequence

  4. XR_007078380.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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