Format

Send to:

Choose Destination

LINC02220 long intergenic non-protein coding RNA 2220 [ Homo sapiens (human) ]

Gene ID: 105374658, updated on 23-Nov-2021

Summary

Official Symbol
LINC02220provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2220provided by HGNC
Primary source
HGNC:HGNC:53087
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC02220 in Genome Data Viewer
Location:
5p15.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (12877472..13032886, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (12877584..13032998, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374656 Neighboring gene uncharacterized LOC105374655 Neighboring gene long intergenic non-protein coding RNA 1194 Neighboring gene uncharacterized LOC105374657 Neighboring gene EZH inhibitory protein pseudogene Neighboring gene uncharacterized LOC105374659 Neighboring gene ribosomal protein S23 pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147005.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC106794, AC109459

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    12877472..13032886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center