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SIAH2-AS1 SIAH2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105374155, updated on 21-Mar-2023

Summary

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Official Symbol
SIAH2-AS1provided by HGNC
Official Full Name
SIAH2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40526
See related
AllianceGenome:HGNC:40526
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See SIAH2-AS1 in Genome Data Viewer
Location:
3q25.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (150761937..150873555)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr3.4444 Neighboring gene uncharacterized LOC101928105 Neighboring gene siah E3 ubiquitin protein ligase 2 Neighboring gene uncharacterized LOC124909447 Neighboring gene MINDY family member 4B Neighboring gene uncharacterized LOC124909446 Neighboring gene Sharpr-MPRA regulatory region 9248

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000003.12 Chromosome 3 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

General gene information

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Other Names

  • SIAH2 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    150761937..150873555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007096130.1 RNA Sequence

  2. XR_007096129.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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