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RAB17-DT RAB17 divergent transcript [ Homo sapiens (human) ]

Gene ID: 105373958, updated on 21-Mar-2023

Summary

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Official Symbol
RAB17-DTprovided by HGNC
Official Full Name
RAB17 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:56028
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 4.8), small intestine (RPKM 4.0) and 13 other tissues See more
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Genomic context

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See RAB17-DT in Genome Data Viewer
Location:
2q37.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (237590841..237595985)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (238080770..238085915)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene prolactin releasing hormone Neighboring gene RAB17, member RAS oncogene family Neighboring gene VISTA enhancer hs1945 Neighboring gene LRR binding FLII interacting protein 1 Neighboring gene Sharpr-MPRA regulatory region 636

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

General gene information

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Clone Names

  • AC104667.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    237590841..237595985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001739965.3 RNA Sequence

  2. XR_007088144.1 RNA Sequence

  3. XR_001739964.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    238080770..238085915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072981.1 RNA Sequence

  2. XR_007072982.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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