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LINC02557 long intergenic non-protein coding RNA 2557 [ Homo sapiens (human) ]

Gene ID: 105372955, updated on 8-Apr-2022

Summary

Official Symbol
LINC02557provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2557provided by HGNC
Primary source
HGNC:HGNC:53596
See related
AllianceGenome:HGNC:53596
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02557 in Genome Data Viewer
Location:
22q11.23
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (23510493..23513334, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (23949814..23961142, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1659 Neighboring gene family with sequence similarity 230 member I Neighboring gene uncharacterized LOC107985580 Neighboring gene endogenous retrovirus group K member 5 Gag polyprotein-like Neighboring gene Sharpr-MPRA regulatory regions 962 and 2236 Neighboring gene prostate cancer associated transcript 14

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    23510493..23513334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068019.1 RNA Sequence

  2. XR_938072.2 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187632.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    173036..184394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756411.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    23949814..23961142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090503.1 RNA Sequence

  2. XR_007090502.1 RNA Sequence