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NFILZ NFIL3 like basic leucine zipper [ Homo sapiens (human) ]

Gene ID: 105372267, updated on 5-Jan-2022

Summary

Official Symbol
NFILZprovided by HGNC
Official Full Name
NFIL3 like basic leucine zipperprovided by HGNC
Primary source
HGNC:HGNC:52681
See related
Ensembl:ENSG00000268480
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC01862
Summary
Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in immune response; regulation of transcription, DNA-templated; and transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Restricted expression toward testis (RPKM 2.1) See more
Orthologs
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Genomic context

See NFILZ in Genome Data Viewer
Location:
19p13.2
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (8630633..8681151)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (8740083..8791414)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene myosin IF Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 10 Neighboring gene Sharpr-MPRA regulatory region 9055 Neighboring gene actin like 9 Neighboring gene ribosomal protein L23a pseudogene 78 Neighboring gene olfactory receptor family 2 subfamily Z member 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
NFIL3 like protein
Names
long intergenic non-protein coding RNA 1862
nuclear factor interleukin-3-regulated protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378599.1NP_001365528.1  NFIL3 like protein

    Status: VALIDATED

    Source sequence(s)
    AC243312
    Related
    ENSP00000499970.1, ENST00000673603.2
    Conserved Domains (1) summary
    cd14694
    Location:4198
    bZIP_NFIL3; Basic leucine zipper (bZIP) domain of Nuclear factor interleukin-3-regulated protein (NFIL3): a DNA-binding and dimerization domain
  2. NM_001378600.1NP_001365529.1  NFIL3 like protein

    Status: VALIDATED

    Source sequence(s)
    AC243312
    Related
    ENSP00000509575.1, ENST00000691075.1
    Conserved Domains (1) summary
    cd14694
    Location:4198
    bZIP_NFIL3; Basic leucine zipper (bZIP) domain of Nuclear factor interleukin-3-regulated protein (NFIL3): a DNA-binding and dimerization domain
  3. NM_001378601.1NP_001365530.1  NFIL3 like protein

    Status: VALIDATED

    Source sequence(s)
    AC243312
    Related
    ENSP00000500121.1, ENST00000570582.4
    Conserved Domains (1) summary
    cd14694
    Location:4198
    bZIP_NFIL3; Basic leucine zipper (bZIP) domain of Nuclear factor interleukin-3-regulated protein (NFIL3): a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    8630633..8681151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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