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LINC01908 long intergenic non-protein coding RNA 1908 [ Homo sapiens (human) ]

Gene ID: 105372037, updated on 10-Dec-2024

Summary

Official Symbol
LINC01908provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1908provided by HGNC
Primary source
HGNC:HGNC:52727
See related
AllianceGenome:HGNC:52727
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01908 in Genome Data Viewer
Location:
18q11.2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (27224060..27274741)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (27418051..27468796)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 9 Neighboring gene uncharacterized LOC124904275 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13195 Neighboring gene uncharacterized LOC105372036 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:24743020-24744219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:24803365-24803888 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:24812317-24813029 Neighboring gene uncharacterized LOC105372038 Neighboring gene uncharacterized LOC105372040

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    27224060..27274741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002958212.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    27418051..27468796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088570.1 RNA Sequence