LINC02594 long intergenic non-protein coding RNA 2594 [Homo sapiens (human)] - Gene

Summary

Official Symbol: LINC02594provided by HGNC
Official Full Name: long intergenic non-protein coding RNA 2594provided by HGNC
Primary source: HGNC:HGNC:53935
See related: AllianceGenome:HGNC:53935
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 17q21.31

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
110	current	GRCh38.p14 (GCF_000001405.40)	17	NC_000017.11 (43669589..43706758)
110	current	T2T-CHM13v2.0 (GCF_009914755.1)	17	NC_060941.1 (44522139..44558796)

Chromosome 17 - NC_000017.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

LncRNAs CTC-501O10.1, AC100830.4 and RP11-210K20.5 were up-regulated in the plasma of gastric cancer patients.
Title: A panel consisting of three novel circulating lncRNAs, is it a predictive tool for gastric cancer?

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

NR_184089.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC004149, AC055813
NR_184090.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC004149, AC055813