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LOC105371730 uncharacterized LOC105371730 [ Homo sapiens (human) ]

Gene ID: 105371730, updated on 10-Oct-2023

Summary

Gene symbol
LOC105371730
Gene description
uncharacterized LOC105371730
See related
Ensembl:ENSG00000214708
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lung (RPKM 2.4), fat (RPKM 1.4) and 24 other tissues See more
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Genomic context

See LOC105371730 in Genome Data Viewer
Location:
17q11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (32141226..32143135, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (33087014..33088899, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (30468245..30470154, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene NF1-REPc PRS2 recombination region Neighboring gene uncharacterized LOC124903973 Neighboring gene uncharacterized LOC102724625 Neighboring gene NF1-REPc PRS3 recombination region Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:30428007-30428812 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:30437320-30438144 Neighboring gene WD repeat domain 45B pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12023 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12024 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12025 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12026 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8418 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8419 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:30483220-30483763 Neighboring gene ras homolog family member T1 Neighboring gene arginine-fifty homeobox pseudogene 2 Neighboring gene NANOG hESC enhancer GRCh37_chr17:30507190-30507714 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:30554572-30555278 Neighboring gene ubiquitin like 5 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136413.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC116407, BM995956, BY800428, CB067470, CK902944
    Related
    ENST00000398832.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    32141226..32143135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    33087014..33088899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)