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LINC02194 long intergenic non-protein coding RNA 2194 [ Homo sapiens (human) ]

Gene ID: 105371142, updated on 13-May-2022

Summary

Official Symbol
LINC02194provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2194provided by HGNC
Primary source
HGNC:HGNC:53057
See related
Ensembl:ENSG00000260264 AllianceGenome:HGNC:53057
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC2194
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02194 in Genome Data Viewer
Location:
16p12.1
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (24236104..24252860)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (24512596..24529356)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (24247425..24264181)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene protein kinase C beta Neighboring gene GATA motif-containing MPRA enhancer 73 Neighboring gene microRNA 1273h Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 3 Neighboring gene small nucleolar RNA SNORA1 Neighboring gene RNA, U7 small nuclear 24 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146569.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BX091969
    Related
    ENST00000567127.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    24236104..24252860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    24512596..24529356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)