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LOC105371090 uncharacterized LOC105371090 [ Homo sapiens (human) ]

Gene ID: 105371090, updated on 10-Oct-2023

Summary

Gene symbol
LOC105371090
Gene description
uncharacterized LOC105371090
See related
Ensembl:ENSG00000260378
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.3) See more
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Genomic context

See LOC105371090 in Genome Data Viewer
Location:
16p13.12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (12745840..12760549)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (12782806..12797584)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371088 Neighboring gene calcineurin like phosphoesterase domain containing 1 Neighboring gene Sharpr-MPRA regulatory region 10358 Neighboring gene microRNA 4718 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10479 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7220 Neighboring gene MPRA-validated peak2502 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7221 Neighboring gene small nucleolar RNA SNORA27 Neighboring gene ribosomal protein L35a pseudogene 34

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    12745840..12760549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007064994.1 RNA Sequence

  2. XR_007064995.1 RNA Sequence

  3. XR_933088.3 RNA Sequence

    Related
    ENST00000564016.1
  4. XR_007064993.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    12782806..12797584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086899.1 RNA Sequence

  2. XR_007086902.1 RNA Sequence

  3. XR_007086900.1 RNA Sequence

  4. XR_007086901.1 RNA Sequence