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LOC105370997 uncharacterized LOC105370997 [ Homo sapiens (human) ]

Gene ID: 105370997, updated on 10-Dec-2024

Summary

Gene symbol
LOC105370997
Gene description
uncharacterized LOC105370997
See related
Ensembl:ENSG00000275443
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in liver (RPKM 1.1), kidney (RPKM 0.9) and 4 other tissues See more
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Genomic context

See LOC105370997 in Genome Data Viewer
Location:
15q26.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (96171583..96174335)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (93936181..93938933)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (96714812..96717564)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112268156 Neighboring gene uncharacterized LOC105369212 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:96630222-96630743 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr15:96678081-96679280 Neighboring gene uncharacterized LOC124903583 Neighboring gene NR2F2 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:96723470-96723970 Neighboring gene NANOG hESC enhancer GRCh37_chr15:96726277-96726778 Neighboring gene uncharacterized LOC124903584 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:96794933-96796132 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:96811550-96812164 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr15:96816434-96817633 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6852 Neighboring gene microRNA 1469 Neighboring gene nuclear receptor subfamily 2 group F member 2

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_188330.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012409
    Related
    ENST00000558449.1
  2. NR_188331.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012409
    Related
    ENST00000744257.1
  3. NR_188332.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012409
    Related
    ENST00000560176.2
  4. NR_188333.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012409

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    96171583..96174335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    93936181..93938933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)