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LOC105369980 uncharacterized LOC105369980 [ Homo sapiens (human) ]

Gene ID: 105369980, updated on 23-Nov-2021

Summary

Gene symbol
LOC105369980
Gene description
uncharacterized LOC105369980
See related
Ensembl:ENSG00000258240
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC105369980 in Genome Data Viewer
Location:
12q24.11
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (110951683..110957818, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (111389487..111395622, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs2493 Neighboring gene long intergenic non-protein coding RNA 1405 Neighboring gene uncharacterized LOC105369981 Neighboring gene VISTA enhancer hs611 Neighboring gene cut like homeobox 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135001.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) reprsents the longer transcript.
    Source sequence(s)
    DA146183, DA302221, HY021340
    Related
    ENST00000548329.1
  2. NR_135002.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site, resulting in a shorter transcript than variant 1.
    Source sequence(s)
    DA146183, DA148561, HY021340
    Related
    ENST00000546852.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    110951683..110957818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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