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C12orf75-AS1 C12orf75 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105369954, updated on 17-Jun-2024

Summary

Official Symbol
C12orf75-AS1provided by HGNC
Official Full Name
C12orf75 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55936
See related
Ensembl:ENSG00000257642
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KCCAT198
Expression
Low expression observed in reference dataset See more
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Genomic context

See C12orf75-AS1 in Genome Data Viewer
Location:
12q23.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (105304867..105327017, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (105266683..105288833, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (105698645..105720795, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6940 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4804 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4805 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6941 Neighboring gene WASH complex subunit 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:105593258-105593758 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:105593759-105594259 Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4806 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4807 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:105629835-105630335 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:105639601-105640102 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:105655901-105656075 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6942 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4809 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4810 Neighboring gene NANOG hESC enhancer GRCh37_chr12:105725551-105726094 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:105737531-105738087 Neighboring gene chromosome 12 open reading frame 75 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4811 Neighboring gene uncharacterized LOC105369957

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • renal clear cell carcinoma-associated transcript 198

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131986.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DA686940
    Related
    ENST00000549251.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    105304867..105327017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    105266683..105288833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)