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LINC02455 long intergenic non-protein coding RNA 2455 [ Homo sapiens (human) ]

Gene ID: 105369597, updated on 29-Mar-2023

Summary

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Official Symbol
LINC02455provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2455provided by HGNC
Primary source
HGNC:HGNC:53388
See related
AllianceGenome:HGNC:53388
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LINC02455 in Genome Data Viewer
Location:
12p13.33
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (673841..716612, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (669659..712565, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ninjurin 2 Neighboring gene Sharpr-MPRA regulatory region 6322 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:775809-776308 Neighboring gene uncharacterized LOC101929432 Neighboring gene CRISPRi-validated cis-regulatory element chr12.51 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:861758-862476 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:862477-863195 Neighboring gene WNK lysine deficient protein kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    673841..716612 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001748952.3 RNA Sequence

  2. XR_931543.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    669659..712565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082705.1 RNA Sequence

  2. XR_007082706.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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