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MIR194-2HG MIR194-2 host gene [ Homo sapiens (human) ]

Gene ID: 105369343, updated on 23-Nov-2021

Summary

Official Symbol
MIR194-2HGprovided by HGNC
Official Full Name
MIR194-2 host geneprovided by HGNC
Primary source
HGNC:HGNC:51946
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in small intestine (RPKM 9.0), duodenum (RPKM 8.0) and 4 other tissues See more
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Genomic context

See MIR194-2HG in Genome Data Viewer
Location:
11q13.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (64888458..64893449, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (64655930..64660921, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene EH domain containing 1 Neighboring gene microRNA 10392 Neighboring gene ribosomal protein S16 pseudogene 6 Neighboring gene microRNA 194-2 Neighboring gene microRNA 192 Neighboring gene autophagy related 2A Neighboring gene microRNA 6750 Neighboring gene microRNA 6749

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • pri-microRNA-194-2, -192

Clone Names

  • FLJ26898, AP001187.9

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in gene silencing by miRNA IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_133638.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AK092802, AP001187
  2. NR_133639.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate splice site in the 5' region and differs in the 3' exon structure, resulting in a shorter transcript than variant 1.
    Source sequence(s)
    AP001187
  3. NR_133640.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) contains an alternate splice site in the 5' region and differs in the 3' exon structure, resulting in a shorter transcript than variant 1.
    Source sequence(s)
    AP001187

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    64888458..64893449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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