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LINC02934 long intergenic non-protein coding RNA 2934 [ Homo sapiens (human) ]

Gene ID: 105369168, updated on 10-Oct-2023

Summary

Official Symbol
LINC02934provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2934provided by HGNC
Primary source
HGNC:HGNC:55913
See related
AllianceGenome:HGNC:55913
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02934 in Genome Data Viewer
Location:
2p14
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (65790075..66088485)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (65800857..66099316)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985889 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:65927762-65927952 Neighboring gene uncharacterized LOC105369167 Neighboring gene Sharpr-MPRA regulatory region 8914 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:66001201-66001469 Neighboring gene MPRA-validated peak3734 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:66016952-66017452 Neighboring gene HHc2:065915 enhancer upstream of MEIS1 Neighboring gene HHc2:065944 enhancer upstream of MEIS1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:66157143-66157642 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:66184819-66185607 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:66270681-66271880 Neighboring gene VISTA enhancer hs205 Neighboring gene uncharacterized LOC107985890 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:66397659-66398858 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:66404589-66405197 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:66470915-66471860 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:66471861-66472806 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:66475534-66476457 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:66476458-66477380 Neighboring gene uncharacterized LOC107985812

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187140.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007741, AC009503, AC074391
  2. NR_187141.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007741, AC009503, AC023351, AC074391

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    65790075..66088485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    65800857..66099316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)