U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AW495222 expressed sequence AW495222 [ Mus musculus (house mouse) ]

Gene ID: 105364, updated on 26-Sep-2022

Summary

Official Symbol
AW495222provided by MGI
Official Full Name
expressed sequence AW495222provided by MGI
Primary source
MGI:MGI:2145435
See related
Ensembl:ENSMUSG00000087334 AllianceGenome:MGI:2145435
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in liver adult (RPKM 13.7), liver E18 (RPKM 6.1) and 6 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See AW495222 in Genome Data Viewer
Location:
13 C3; 13
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (93842608..93855683, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (93706100..93719175, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene betaine-homocysteine methyltransferase Neighboring gene betaine-homocysteine methyltransferase 2 Neighboring gene dimethylglycine dehydrogenase precursor Neighboring gene predicted gene, 41021 Neighboring gene arylsulfatase B Neighboring gene microRNA 5624

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045086.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131739
    Related
    ENSMUST00000149839.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    93842608..93855683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)