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Gm42141 predicted gene, 42141 [ Mus musculus (house mouse) ]

Gene ID: 105246948, updated on 8-Feb-2024

Summary

Official Symbol
Gm42141provided by MGI
Official Full Name
predicted gene, 42141provided by MGI
Primary source
MGI:MGI:5625026
See related
AllianceGenome:MGI:5625026
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm43819
Expression
Biased expression in thymus adult (RPKM 1.8), genital fat pad adult (RPKM 0.6) and 7 other tissues See more
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Genomic context

See Gm42141 in Genome Data Viewer
Location:
5 E5; 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (105643288..105644795)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (105495422..105496929)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E8067 Neighboring gene RIKEN cDNA 4930542N06 gene Neighboring gene predicted gene, 32051 Neighboring gene STARR-seq mESC enhancer starr_13851 Neighboring gene leucine rich repeat containing 8 family, member B Neighboring gene STARR-seq mESC enhancer starr_13852 Neighboring gene STARR-positive B cell enhancer ABC_E6355 Neighboring gene predicted gene, 42144 Neighboring gene leucine rich repeat containing 8 family, member C Neighboring gene STARR-seq mESC enhancer starr_13855 Neighboring gene STARR-positive B cell enhancer mm9_chr5:105986877-105987177 Neighboring gene STARR-seq mESC enhancer starr_13856 Neighboring gene STARR-seq mESC enhancer starr_13857

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    105643288..105644795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942754.1 RNA Sequence