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Gm28535 predicted gene 28535 [ Mus musculus (house mouse) ]

Gene ID: 105246665, updated on 8-Feb-2024

Summary

Official Symbol
Gm28535provided by MGI
Official Full Name
predicted gene 28535provided by MGI
Primary source
MGI:MGI:5579241
See related
Ensembl:ENSMUSG00000101172 AllianceGenome:MGI:5579241
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in testis adult (RPKM 1.9), CNS E11.5 (RPKM 1.6) and 17 other tissues See more
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Genomic context

See Gm28535 in Genome Data Viewer
Location:
1 D; 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (93233686..93245034)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (93305964..93317312)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene sushi, nidogen and EGF-like domains 1 Neighboring gene microRNA 6901 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:95202393-95202604 Neighboring gene mitochondrial transcription termination factor 4 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene PAS domain containing serine/threonine kinase Neighboring gene STARR-positive B cell enhancer ABC_E3291 Neighboring gene STARR-positive B cell enhancer ABC_E7733 Neighboring gene protein phosphatase 1, regulatory subunit 7 Neighboring gene microRNA 6902 Neighboring gene microRNA 6345

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_151531.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124669
    Related
    ENSMUST00000188069.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    93233686..93245034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)