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Gm12694 predicted gene 12694 [ Mus musculus (house mouse) ]

Gene ID: 105244623, updated on 17-Aug-2024

Summary

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Official Symbol
Gm12694provided by MGI
Official Full Name
predicted gene 12694provided by MGI
Primary source
MGI:MGI:3651291
See related
AllianceGenome:MGI:3651291
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm12694 in Genome Data Viewer
Location:
4 C5; 4 43.34 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (94900989..94916696)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (94979121..95018964)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12693 Neighboring gene myb-like, SWIRM and MPN domains 1 Neighboring gene STARR-seq mESC enhancer starr_10795 Neighboring gene STARR-positive B cell enhancer ABC_E2697 Neighboring gene STARR-seq mESC enhancer starr_10796 Neighboring gene STARR-positive B cell enhancer ABC_E6190 Neighboring gene STARR-positive B cell enhancer mm9_chr4:94674887-94675187 Neighboring gene STARR-positive B cell enhancer ABC_E6191 Neighboring gene STARR-positive B cell enhancer ABC_E36 Neighboring gene STARR-positive B cell enhancer mm9_chr4:94719886-94720187 Neighboring gene STARR-positive B cell enhancer ABC_E7976 Neighboring gene jun proto-oncogene, opposite strand Neighboring gene jun proto-oncogene Neighboring gene STARR-seq mESC enhancer starr_10797 Neighboring gene STARR-seq mESC enhancer starr_10798 Neighboring gene STARR-positive B cell enhancer ABC_E11247 Neighboring gene STARR-seq mESC enhancer starr_10800

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    94900989..94916696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942103.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials