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Gm21847 predicted gene, 21847 [ Mus musculus (house mouse) ]

Gene ID: 105242428, updated on 25-Jan-2022

Summary

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Official Symbol
Gm21847provided by MGI
Official Full Name
predicted gene, 21847provided by MGI
Primary source
MGI:MGI:5434011
See related
AllianceGenome:MGI:5434011
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm38698
Expression
Biased expression in testis adult (RPKM 8.5), subcutaneous fat pad adult (RPKM 1.0) and 2 other tissues See more
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Genomic context

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See Gm21847 in Genome Data Viewer
Location:
5 A2; 5
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (15716561..15730865)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (15511563..15525867)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene 17019 Neighboring gene predicted gene, 21149 Neighboring gene predicted gene, 21190 Neighboring gene predicted gene, 30613 Neighboring gene predicted gene, 21083 Neighboring gene predicted gene, 30417 Neighboring gene spermatogenesis associated glutamate (E)-rich protein 4D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    15716561..15730865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001784802.1 RNA Sequence

Nucleotide Protein Strain
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