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PGLYRP1 peptidoglycan recognition protein 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105104021, updated on 3-Dec-2024
Gene symbol
PGLYRP1
Gene description
peptidoglycan recognition protein 1
Locus tag
Cadr_000011903
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Also known as
PGRP; PGLYRP; PGRP-S
Orthologs
human mouse all
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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 9 NC_087444.1 (72040233..72044274, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 9 NC_044519.1 (67747255..67751300, complement)

Chromosome 9 - NC_087444.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116154925 Neighboring gene coiled-coil domain containing 61 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene insulin growth factor-like family member 1 Neighboring gene transfer RNA alanine (anticodon UGC)

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylmuramoyl-L-alanine amidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidoglycan immune receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidoglycan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
peptidoglycan recognition protein 1

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087444.1 Reference mCamDro1.pat

    Range
    72040233..72044274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031458921.2 → XP_031314781.2  peptidoglycan recognition protein 1

    UniProtKB/Swiss-Prot
    Q9GK12
    UniProtKB/TrEMBL
    A0A5N4DV82
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9GK12.1 GenPept UniProtKB/Swiss-Prot:Q9GK12

Gene LinkOut

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Molecular Biology Databases