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LOC105023003 CTD small phosphatase-like protein [ Esox lucius (northern pike) ]

Gene ID: 105023003, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105023003
Gene description
CTD small phosphatase-like protein
See related
EnsemblRapid:ENSELUG00000044571
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105023003 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 3 NC_047571.1 (24780108..24801907, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG03 NC_025970.4 (11971607..11993253)

Chromosome 3 - NC_047571.1Genomic Context describing neighboring genes Neighboring gene oxidative stress responsive kinase 1a Neighboring gene phospholipase C, delta 1b Neighboring gene hedgehog acyltransferase like, a Neighboring gene kelch-like protein 40a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CTD small phosphatase-like protein; uncharacterized protein LOC105023003

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047571.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    24780108..24801907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010891848.4 → XP_010890150.1  CTD small phosphatase-like protein isoform X2

    UniProtKB/TrEMBL
    A0A3P8YJA6, A0A3P8YJW7
    Related
    ENSELUP00000095126.1, ENSELUT00000091754.1
    Conserved Domains (2) summary
    COG5190
    Location:105 → 271
    FCP1; TFIIF-interacting CTD phosphatase, includes NLI-interacting factor [Transcription]
    TIGR02251
    Location:106 → 264
    HIF-SF_euk; Dullard-like phosphatase domain

  2. XM_010891857.4 → XP_010890159.1  CTD small phosphatase-like protein isoform X3

    UniProtKB/TrEMBL
    A0A3P8YJA6, A0A3P8YJX7
    Related
    ENSELUP00000085187.1, ENSELUT00000111988.1
    Conserved Domains (2) summary
    COG5190
    Location:68 → 260
    FCP1; TFIIF-interacting CTD phosphatase, includes NLI-interacting factor [Transcription]
    TIGR02251
    Location:95 → 253
    HIF-SF_euk; Dullard-like phosphatase domain

  3. XM_034290920.1 → XP_034146811.1  uncharacterized protein LOC105023003 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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