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LOC105020997 hydroperoxide isomerase ALOXE3-like [ Esox lucius (northern pike) ]

Gene ID: 105020997, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105020997
Gene description
hydroperoxide isomerase ALOXE3-like
See related
Ensembl:ENSELUG00000017066
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105020997 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
15
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 25 NC_047593.1 (12870164..12881061, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG25 NC_025992.4 (9724281..9735170)

Chromosome 25 - NC_047593.1Genomic Context describing neighboring genes Neighboring gene hydroperoxide isomerase ALOXE3-like Neighboring gene hydroperoxide isomerase ALOXE3-like Neighboring gene TBC1 domain containing kinase Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroperoxide isomerase ALOXE3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047593.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    12870164..12881061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010888425.5 → XP_010886727.2  hydroperoxide isomerase ALOXE3-like

    UniProtKB/TrEMBL
    A0A3P8YMJ2
    Related
    ENSELUP00000017362.2, ENSELUT00000040152.3
    Conserved Domains (2) summary
    pfam00305
    Location:167 → 662
    Lipoxygenase
    cl00011
    Location:2 → 117
    PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...
Nucleotide Protein
Heading Accession and Version

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