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SGCE sarcoglycan epsilon [ Bison bison bison ]

Gene ID: 104988440, updated on 12-Mar-2024

Summary

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Gene symbol
SGCE
Gene description
sarcoglycan epsilon
See related
Ensembl:ENSBBBG00000018966
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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See SGCE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494706.1 (4900760..4972306)

NW_011494706.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 9A Neighboring gene paternally expressed 10 Neighboring gene CAS1 domain containing 1 Neighboring gene collagen type I alpha 2 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494706.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epsilon-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494706.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    4900760..4972306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010839759.1 → XP_010838061.1  epsilon-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A6P3H7L4
    Related
    ENSBBBP00000010362.1, ENSBBBT00000018971.1
    Conserved Domains (1) summary
    pfam05510
    Location:73 → 454
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_010839760.1 → XP_010838062.1  epsilon-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A6P3HFC8
    Conserved Domains (1) summary
    pfam05510
    Location:73 → 445
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  3. XM_010839761.1 → XP_010838063.1  epsilon-sarcoglycan isoform X3

    See identical proteins and their annotated locations for XP_010838063.1

    UniProtKB/TrEMBL
    A0A6P3H3J8
    Related
    ENSBBBP00000010357.1, ENSBBBT00000018959.1
    Conserved Domains (1) summary
    pfam05510
    Location:34 → 418
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  4. XM_010839762.1 → XP_010838064.1  epsilon-sarcoglycan isoform X4

    UniProtKB/TrEMBL
    A0A6P3HFZ0
    Related
    ENSBBBP00000010412.1, ENSBBBT00000030546.1
    Conserved Domains (1) summary
    pfam05510
    Location:34 → 409
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

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