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MCUP_RS09095 ATP-dependent DNA ligase [ Metallosphaera cuprina Ar-4 ]

Gene ID: 10494111, updated on 13-Aug-2016
Gene symbol
MCUP_RS09095
Gene description
ATP-dependent DNA ligase
Locus tag
MCUP_RS09095
Gene type
protein coding
Organism
Metallosphaera cuprina Ar-4 (strain: Ar-4)
Lineage
Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera
Old locus tag
Mcup_1923
Sequence:
NC_015435.1 (1747055..1748851)

NC_015435.1Genomic Context describing neighboring genes Neighboring gene glutaredoxin Neighboring gene hypothetical protein Neighboring gene dCTP deaminase Neighboring gene RNA procession exonuclease-like protein Neighboring gene acetyl-CoA carboxylase biotin carboxyl carrier protein subunit Neighboring gene biotin carboxylase

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

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    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
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    DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • DNA replication, conserved biosystem (from KEGG)
    DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Nucleotide excision repair, organism-specific biosystem (from KEGG)
    Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
  • Nucleotide excision repair, conserved biosystem (from KEGG)
    Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
Names
ATP-dependent DNA ligase
WP_013738523.1
  • catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015435.1 Reference assembly

    Range
    1747055..1748851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013738523.1 ATP-dependent DNA ligase [Metallosphaera cuprina]

    See identical proteins and their annotated locations for WP_013738523.1

    UniProtKB/TrEMBL
    F4G1D8
    Conserved Domains (4) summary
    cd07969
    Location:444582
    OBF_DNA_ligase_I; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase I is a DNA-binding module that is part of the catalytic core unit
    cd07901
    Location:230438
    Adenylation_DNA_ligase_Arch_LigB; Adenylation domain of archaeal and bacterial LigB-like DNA ligases
    PRK01109
    Location:1593
    PRK01109; ATP-dependent DNA ligase; Provisional
    pfam04675
    Location:2180
    DNA_ligase_A_N; DNA ligase N terminus
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