Format

Send to:

Choose Destination

rab5c RAB5C, member RAS oncogene family [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104926007, updated on 8-Apr-2017

Summary

Gene symbol
rab5c
Gene description
RAB5C, member RAS oncogene family
Locus tag
EH28_20654
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs

Genomic context

See rab5c in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608220.1 (1020502..1030552, complement)
100 previous assembly ASM74293v1 (GCF_000742935.1) Unplaced Scaffold NW_011322440.1 (289916..300018)

NW_017608220.1Genomic Context describing neighboring genes Neighboring gene DExH-box helicase 58 Neighboring gene lysine acetyltransferase 2A Neighboring gene potassium voltage-gated channel subfamily H member 4 Neighboring gene hypocretin neuropeptide precursor

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Endocytosis, organism-specific biosystem (from KEGG)
    Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
  • Endocytosis, conserved biosystem (from KEGG)
    Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
  • Phagosome, organism-specific biosystem (from KEGG)
    Phagosome, organism-specific biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
  • Phagosome, conserved biosystem (from KEGG)
    Phagosome, conserved biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...

General protein information

Preferred Names
ras-related protein Rab-5C
Names
Ras-related protein Rab-5C

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_1.0 Primary Assembly

Genomic

  1. NW_017608220.1 Reference L_crocea_1.0 Primary Assembly

    Range
    1020502..1030552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010739774.2XP_010738076.1  ras-related protein Rab-5C

    See identical proteins and their annotated locations for XP_010738076.1

    Conserved Domains (2) summary
    cd01860
    Location:21183
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
    pfam00071
    Location:23184
    Ras; Ras family
Support Center