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clasp2 cytoplasmic linker associated protein 2 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104922087, updated on 8-Apr-2017

Summary

Gene symbol
clasp2
Gene description
cytoplasmic linker associated protein 2
Locus tag
EH28_25127
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs

Genomic context

See clasp2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
49
Annotation release Status Assembly Chr Location
101 current L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608616.1 (2963741..3015464)
100 previous assembly ASM74293v1 (GCF_000742935.1) Unplaced Scaffold NW_011322597.1 (1095453..1149055, complement)

NW_017608616.1Genomic Context describing neighboring genes Neighboring gene sushi domain containing 5 Neighboring gene F-box and leucine rich repeat protein 2 Neighboring gene upstream binding protein 1 Neighboring gene programmed cell death 6 interacting protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_1.0 Primary Assembly

Genomic

  1. NW_017608616.1 Reference L_crocea_1.0 Primary Assembly

    Range
    2963741..3015464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019264230.1XP_019119775.1  CLIP-associating protein 2 isoform X2

  2. XM_019264229.1XP_019119774.1  CLIP-associating protein 2 isoform X1

  3. XM_019264237.1XP_019119782.1  CLIP-associating protein 2 isoform X10

  4. XM_019264239.1XP_019119784.1  CLIP-associating protein 2 isoform X12

  5. XM_019264233.1XP_019119778.1  CLIP-associating protein 2 isoform X5

  6. XM_019264238.1XP_019119783.1  CLIP-associating protein 2 isoform X11

  7. XM_019264234.1XP_019119779.1  CLIP-associating protein 2 isoform X6

  8. XM_019264231.1XP_019119776.1  CLIP-associating protein 2 isoform X3

  9. XM_019264232.1XP_019119777.1  CLIP-associating protein 2 isoform X4

  10. XM_010734812.2XP_010733114.1  CLIP-associating protein 2 isoform X7

    Conserved Domains (2) summary
    pfam12348
    Location:331532
    CLASP_N; CLASP N terminal
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
  11. XM_010734819.2XP_010733121.1  CLIP-associating protein 2 isoform X15

    Conserved Domains (2) summary
    pfam12348
    Location:331532
    CLASP_N; CLASP N terminal
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
  12. XM_019264236.1XP_019119781.1  CLIP-associating protein 2 isoform X9

  13. XM_019264240.1XP_019119785.1  CLIP-associating protein 2 isoform X13

  14. XM_019264241.1XP_019119786.1  CLIP-associating protein 2 isoform X14

  15. XM_019264242.1XP_019119787.1  CLIP-associating protein 2 isoform X16

  16. XM_019264243.1XP_019119788.1  CLIP-associating protein 2 isoform X19

  17. XM_019264244.1XP_019119789.1  CLIP-associating protein 2 isoform X20

  18. XM_019264235.1XP_019119780.1  CLIP-associating protein 2 isoform X8

  19. XM_019264250.1XP_019119795.1  CLIP-associating protein 2 isoform X26

  20. XM_019264248.1XP_019119793.1  CLIP-associating protein 2 isoform X24

  21. XM_019264249.1XP_019119794.1  CLIP-associating protein 2 isoform X25

  22. XM_010734820.2XP_010733122.1  CLIP-associating protein 2 isoform X17

    Conserved Domains (2) summary
    pfam12348
    Location:331532
    CLASP_N; CLASP N terminal
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
  23. XM_010734822.2XP_010733124.1  CLIP-associating protein 2 isoform X18

    Conserved Domains (2) summary
    pfam12348
    Location:331532
    CLASP_N; CLASP N terminal
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
  24. XM_019264247.1XP_019119792.1  CLIP-associating protein 2 isoform X23

  25. XM_019264246.1XP_019119791.1  CLIP-associating protein 2 isoform X22

  26. XM_019264245.1XP_019119790.1  CLIP-associating protein 2 isoform X21

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